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Home / Blog / Recipes

Chocolate Thumbprint Cookies

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By:

Madeline

Updated: November 22, 2025

This site may contain affiliate links. Please read my disclosure policy.

These Chocolate Thumbprint Cookies are the perfect holiday cookie! Swap the jelly in your buttery shortbread cookies for a creamy chocolate ganache.

Chocolate ganache cookies on a serving board

Make-ahead

Beginner-friendly

You’ll Learn: The trick to reinforcing the thumbprint divot after baking

Worth It: Easy enough to make multiple batches

Bonus: Simple swaps to match what’s in your pantry

Above view of chocolate thumbprint cookies on a serving tray

Why You’ll Love this Recipe

  • Perfect for Holidays – These soft and delicious shortbread chocolate ganache cookies will be a hit for any cookie swap, holiday party, or just a sweet treat for you and your loved ones!
  • Simple Recipe – Because it only takes 5 minutes of prep time to make these cookies, they might be the simplest holiday or Christmas cookies you could make. The total time for this recipe is just an hour and a half, and an hour of that is for the cookie dough to chill!
  • Customizable – If a traditional thumbprint cookie is more your style, you can substitute jam instead of making the ganache. Raspberry would be my flavor of choice but you can use whatever flavor of jam you prefer as an addition to these buttery cookies.
Above view of ingredients for chocolate thumbprint cookies

Serving Suggestions

These delicious chocolate thumbprint cookies are the perfect addition to any holiday gathering. You can serve them after a cozy meal like this Creamy Tuscan Chicken Pasta.

They are also a perfect addition to a platter of Christmas cookies. I like to have them with a warm peppermint mocha latte as an afternoon snack.

Baking Tips

Chocolate thumbprint cookies look super festive and cute, but if we don’t follow the proper steps, they may lose their shape in the baking process. The most important step is refrigerating the dough for at least an hour.

I like to scoop the cookies before I put them in the fridge to really make everything easier. Scooping hard dough is tough; it is much easier with room temperature dough!

Sometimes they slightly lose the thumbprint during the baking process because the cookies rise. If this happens, just use the back of a kitchen spoon to reinforce the divot.

To stop them from spreading, one of the most important parts of this recipe is chilling the dough. The dough must be chilled after making the thumbprint indent and before baking.

Another important tip is to not make the thumbprint indent too big. Just press lightly to make an indent but don’t press through the cookie.

Buttery shortbread cookies filled with chocolate ganache and topped with powdered sugar

Ingredients

  • Unsalted butter – make sure to use unsalted butter for the best results when baking
  • Granulated sugar – sweeten these cookies with granulated sugar
  • Brown sugar – the brown sugar helps sweeten the cookies, as well, but also adds a slight nutty flavor
  • All purpose flour – the flour brings the dough together
  • Baking powder – a bit of baking powder helps the cookies rise
  • Salt – the salt deepens the flavors in these cookies
  • Egg yolks – you only need the yolks of eggs for this recipe
  • Vanilla extract – vanilla helps to enhance all the flavors in this recipe
  • Heavy cream (or coconut cream, see below) – this is to make the creamy ganache
  • Semi sweet chocolate chips – I like semi-sweet best for the flavor. You can also use a chopped semi sweet chocolate bar instead of chips

Chocolate Ganache Tips

The key to these chocolate ganache cookies is a smooth and creamy garnache. Chocolate ganache is a simple combination of warmed heavy cream and chocolate to form a smooth and silky filling.

The softness of ganache depends on the ratios. A one to one chocolate to heavy cream ratio is the standard, but it never quite hardens.

More heavy cream results in a thinner ganache and less heavy cream results in a thicker ganache. This recipe uses a bit less heavy cream than one to one so the filling thickens in your cookies!

You can also substitute a full fat coconut milk (from the can) in place of heavy cream if you are sensitive to dairy.

Looking for other delicious desserts made with chocolate ganache? Try this chocolate ganache cake or banana bars with chocolate ganache.

Steps 1 and 2 for making chocolate thumbprint cookies

How to make

Step 1: Make the shortbread dough

Combine the flour, baking powder, and salt together in a medium bowl and set aside. Place butter and sugar in a large bowl (Image 1).

Beat the butter and sugar together with an electric mixer until just combined (Image 2). Don’t over beat to avoid spreading when baked.

Steps 3 and 4 for making chocolate thumbprint cookies

Add the egg yolks and vanilla extract and beat to combine, scraping the sides as needed (Image 3).

Gradually mix in the flour mixture, again scraping the sides as needed, and stir until fully combined (Image 4).

Steps 5 and 6 for making chocolate thumbprint cookies

Step 3: Scoop and Thumbprint

Line a large plate or something that will fit in your fridge with parchment paper. Scoop cookie dough balls with a 1.5 tablespoon cookie scoop and roll into a ball.

Press down into the center of each ball with your thumb to make an indent, making sure not to puncture through the bottom (Image 5).

Line the plate with the chocolate thumbprint cookies and place in the fridge for at least one hour.

Step 4: Bake

Place the cookies on a parchment lined baking sheet. Bake the cookies at 375F for 10-12 minutes, until golden brown around the edges (Image 6).

The thumbprint divot may have been slightly lost in the oven. Take a kitchen spoon and press back down in the divots while the cookies are still warm.

Cool cookies completely.

Steps 7 and 8 for making chocolate thumbprint cookies

Step 5: Make The Ganache And Fill

Heat the heavy cream until just under a boil and pour it over the semi-sweet chocolate chips. Whisk together until completely smooth (Image 7).

Let the ganache cool for at least 10 minutes. Then spoon it into the center of the cookies (Image 8). Allow the ganache to set fully in the cookies and enjoy!

Chocolate ganache cookies on a serving board

Storage and freezing

Store these chocolate thumbprint cookies in an airtight container on the counter for up to 4 days.

You can freeze these cookies for later. Place the chocolate thumbprint cookies in an airtight container and freeze for up to 3 months. Allow the cookies to thaw in the fridge or on the counter and enjoy!

Check out these other Cookie Recipes

  • White Chocolate Cranberry Oatmeal Cookies
  • Chocolate Chip Mocha Cookies
  • Cherry Chocolate Chip Cookies
  • M&M Sugar Cookies
  • Candy Cane Cookies

You can find the full recipe below. If you make this recipe, please rate and review it in the comments, or share it with me on Instagram!

You can find the full recipe below. If you make this recipe, please rate and review it in the comments, or share it with me on Instagram!

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Chocolate ganache cookies on a serving board

Recipe

Chocolate Thumbprint Cookies

5 from 9 votes
Make chocolate thumprint cookies that are buttery shortbread cookies filled with a smooth chocolate ganache.
Recipe By: Madeline
Prep: 5 minutes minutes
Cook: 30 minutes minutes
Print Review Pin It SaveSaved!
Servings: 24 cookies

Ingredients

  • 1 cup 2 sticks unsalted butter – softened
  • 1/2 cup granulated sugar
  • 1/4 cup packed brown sugar
  • 2 1/4 cups all purpose flour
  • 1/2 tsp baking powder
  • 1/4 tsp salt
  • 2 egg yolks
  • 1 tsp vanilla extract
  • 1/2 cup heavy cream
  • 1/2 cup semi sweet chocolate chips
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Instructions

  • Combine flour, baking powder and salt together in a bowl and set to the side. Beat softened butter and sugar together with an electric mixer until just combined. Don’t over beat because it can cause the cookies to spread when baked.
  • Add the egg yolks and vanilla extract into the bowl and beat to combine, scraping the sides as needed. Gradually mix in the flour mixture, again scraping the sides as needed, until fully combined.
  • Line a large plate or something that will fit in your fridge with parchment paper. Scoop dough balls with a 1.5 tbsp cookie scoop and roll each into a nice tight ball. Then, press down into the center of each ball with your thumb – nearly to the bottom, but not puncturing through. Place them all on the parchment lined plate or tray.
  • Chill the dough balls for at least one hour in the refrigerator. Preheat the oven to 375F and transfer the dough to a parchment lined baking sheet, leaving some space between them
  • Bake the cookies at 375F for 10-12 minutes, until golden brown around the edges. The thumbprint may have risen some as the cookies baked so you can push it back down while the cookies are hot with the back of a small spoon.
  • Allow the cookies to cool completely and while they cool prepare the ganache. Heat heavy cream until just under a boil then pour it over the chocolate chips in a small mixing bowl. Whisk the cream and chocolate together vigorously until the chocolate is fully melted and a smooth mixture remains. Let the ganache sit for at least 10 minutes.
  • Spoon the chocolate ganache into the center of the fully cooled cookies. Serve the cookies on their own or topped with powdered sugar or melted caramel!

Nutrition Information

Serving: 1g, Calories: 179kcal (9%), Carbohydrates: 18g (6%), Protein: 2g (4%), Fat: 11g (17%), Saturated Fat: 7g (44%), Polyunsaturated Fat: 1g, Monounsaturated Fat: 3g, Trans Fat: 0.3g, Cholesterol: 42mg (14%), Sodium: 37mg (2%), Potassium: 46mg (1%), Fiber: 1g (4%), Sugar: 8g (9%), Vitamin A: 333IU (7%), Vitamin C: 0.03mg, Calcium: 18mg (2%), Iron: 1mg (6%)

This website provides approximate nutrition information for convenience and as a courtesy only. Nutrition data is gathered primarily from the USDA Food Composition Database, whenever available, or otherwise other online calculators.

Did you make my Chocolate Thumbprint Cookies?

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Hi, I’m Madeline! I am so excited to share my healthy and approachable recipes with you. Here you will find simple, comforting recipes that the whole family will enjoy. Turn on your favorite playlist or podcast and let’s get cooking!
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Recipe Rating




18 responses

  1. Amanda
    December 6, 2021

    5 stars
    Love this recipe! I can’t wait to make these for my friend’s Christmas party soon!!

    Reply
    1. Madeline
      December 8, 2021

      yay I hope everyone loves them! Thanks!

      Reply
  2. Emma
    December 7, 2021

    5 stars
    These came out great! The coconut cream substitute worked perfectly. The cookie itself isn’t too sweet so the coconut chocolate ganache was a perfect complement. The only change I wish I had made was slightly smaller cookies – 1 tsp sized balls would probably have been plenty large, but I still got 28 out of the 1.5 tsp size.

    Reply
    1. Madeline
      December 8, 2021

      I’m glad you liked the coconut sub! thanks Emma!

      Reply
  3. Karen
    December 8, 2021

    5 stars
    Nice recipe! I thought the cookie was very delicious – made half with the chocolate and half with raspberry jam.

    Reply
  4. Rachel
    December 9, 2021

    5 stars
    So delish!! Thanks!!

    Reply
    1. Madeline
      December 9, 2021

      thank you Rachel!

      Reply
  5. Danielle
    December 9, 2021

    5 stars
    such a quick and easy recipe!! the ingredients are things I always have in my pantry this time of year- came in SO handy for a last minute party I have tonight!

    Reply
    1. Madeline
      December 9, 2021

      yay perfect! love when that happens. thanks Danielle!

      Reply
  6. Stephanie
    January 6, 2023

    5 stars
    These were a hit for a new cookie this Christmas! Ganache adds the perfect amount of sweet.

    Reply
  7. Sarah
    December 26, 2023

    5 stars
    These cookies. Wow! Ours spread a little while baking (probably because we overworked the dough. Baking with kids, sigh), and we filled with jelly instead of chocolate, but I CANNOT STOP eating them! They are so buttery and perfectly sweet. Obsessed. Definitely making again!

    Reply
    1. Madeline
      December 26, 2023

      oh my goodness i am SO glad!!

      Reply
  8. Diana A
    September 29, 2024

    5 stars
    I have made these cookies twice now a year or so apart. I love how the cookie comes out buttery and melts in your mouth. The semi sweet chocolate ganache is a good pairing. We love these cookies and the recipe is in our recipe box now.

    Reply
    1. Madeline
      September 30, 2024

      Thank you so much, Diana!

      Reply
  9. Mary
    December 18, 2024

    5 stars
    My new thumbprint recipe for holiday baking! I made a batch of the chocolate ganache (yum!), and also batches of raspberry jam & lemon curd. The tip to roll and indent the cookies and then chill is genius.

    Reply
    1. Madeline
      December 19, 2024

      Yum! All those variations sound so good!

      Reply
  10. Kelsea
    January 4, 2025

    These are so yummy! Such a great change from the traditional jam filled ones. My family & I absolutely loved these.

    Reply
    1. Madeline
      January 5, 2025

      Aww yay! So glad to hear it.

      Reply

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