Download a FREE E-Book with 20 Easy Weeknight Dinners
  • Facebook
  • Instagram
  • Pinterest
  • YouTube
  • TikTok
About
Lifestyle
Favorite Products
Contact
Mad About Food
  • Recipe Index
    • AppetizersBrowse a variety of appetizers from dips to wings to charcuterie board. Whether you are serving a crowd or just a few people, you can find an appetizer for any occasion here.
    • BreakfastPeople say breakfast is the most important meal of the day! Grab one of these breakfast recipes to get your day started on the right foot.
    • LunchLunch does not get enough credit! Browse a variety of lunch recipes that are perfect for a lunch with friends or to pack into your lunchbox for work.
    • DinnerBrowse a variety of dinner recipes. Some of them are good for just a few people and some can feed a crowd. They are all satisfying.
    • SidesDon’t settle for boring sides! Serve these flavor packed side dishes along side your entree.
    • DessertLooking for something sweet? Try one of my dessert recipes. I like to keep things simple when I bake so you won’t find any complicated recipes here.
    • SnackI love to grab healthy snacks between meals. Browse a selection of satisfying snack recipes here.
    • CocktailsUse these simple cocktail recipes to whip up restaurant quality cocktails in your own home.
    • Sauces, Dips, and DressingsBoost the flavor of any meal with these sauces, dips, and dressings! Browse a selection of everything from simple marinades to cheesy baked dips.
    • ChickenChicken is such a versatile protein! Check out these delicious recipes that feature chicken as a the main ingredient.
    • BeefBeef is the star ingredient in these simple recipes. Browse recipes made with a variety of cuts of beef from steaks to ground beef.
    • PorkPork is the star ingredient in these simple recipes. Browse recipes made with a variety of cuts of pork from pork chops to ground pork.
    • SeafoodBrowse a list of recipes with seafood as the main ingredient. These healthy recipes are made with salmon, shrimp, tuna, and other kinds of seafood.
    • TurkeyTurkey is the star ingredient in these simple recipes. Browse recipes made with a variety of cuts of turkey from a bone in Thanksgiving turkey breast to ground turkey meatballs.
    • MeatlessBrowse a variety of meatless meals made with simple, whole ingredients.
    • Instant PotUse your Instant Pot or pressure cooker to speed up meal time. Browse a variety of recipes that you can quickly prepare in your Instant Pot.
    • Air FryerUse your air fryer to get the satisfying crisp and crunch of deep frying without the oil. You will be amazed at home many delicious meals you can make in your air fryer!
    • GrillingThere is nothing better than cooking dinner on the grill on a warm night. Whether you’re preparing a small meal or cooking for a crowd at a backyard barbecue, you can find a satisfying recipe here.
    • 30 Minute MealsThis 30 minute meals page is a list of my favorite dishes and meals that come together in 30 minutes or less! Take a look at this list when you need to get dinner on the table ASAP!
    • One Pan MealSave time and dirty less dishes with these delicious one pan meals. Make a full meal on a sheet pan or in a skillet.
    • Gluten FreeAvoiding gluten? Check out these delicious and satisfying recipes that just happen to also be gluten free!
    • Dairy FreeNo dairy? No problem! Browse this selection of dairy free recipes from sauces to entrees to desserts!
    • VeganBrowse a variety of plant based recipes here. These healthy vegan recipes are made without any animal products, but are still loaded with flavor!
    • VegetarianAvoiding meat? Check out these delicious vegetarian recipes made with whole ingredients.
    • Egg FreeBrowse Mad About Food recipes made without eggs.
    • Nut FreeBrowse a variety of healthy recipes made without nuts including nut free desserts, appetizers, and entrees.
    • High Protein
    • About
    • Lifestyle
    • Favorite Products
    • Contact
    • Facebook
    • Instagram
    • Pinterest
    • YouTube
    • TikTok
Search

Trending:

Thanksgiving
30 Minute Meals
High Protein
Air Fryer
One Pan
Meal Prep
Breakfast
Home / Blog / Recipes

Healthy Double Chocolate Muffins

Jump to Recipe

By:

Madeline

Updated: April 29, 2024

This site may contain affiliate links. Please read my disclosure policy.

These Healthy Double Chocolate Muffins are so delicious and fluffy, no one will know they’re gluten free. Serve these healthy chocolate muffins for dessert or a snack!

Weeknight-easy

Beginner-friendly

You’ll Learn: How to batch, store, and reheat for meal prep

Worth It: Simple ingredients, minimal work, great taste

Bonus: Easy to customize to your preferences

side view of healthy chocolate muffins stacked on  a cooling rack

These Double chocolate Chip muffins are the perfect balance of fluffy and rich

I don’t have much of a sweet tooth, but when I am craving something sweet, I want it to be extra chocolaty. Therefore, I created this healthy chocolate chip muffin recipe to taste as close as possible to a slice of rich chocolate cake.

It might shock you to see that I use some pumpkin puree to make these muffins extra moist. They don’t taste like the pumpkin at all, but it gives them extra moisture and rise like a true bakery muffin.

There is just something about reaching for a soft and fluffy muffin as a snack that is so satisfying. My favorite time to enjoy these double chocolate muffins is in the mid afternoon as a little pick me up.

They are so rich and delicious that you could even serve them with a bit of chocolate buttercream on top like a cupcake.

three quarter view of healthy double chocolate muffins on a cooling rack

Kitchen tools

  • Muffin pan
  • Cupcake liners – you can use folded parchment paper instead of the liners
  • Mixing bowls
  • Measuring cups and measuring spoons
  • Liquid measuring cup
  • Mixing spoons

serving Suggestions

Like I said, my favorite way to enjoy these gluten free chocolate chip muffins is in the mid afternoon. They are perfect alongside a cup of coffee or tea.

I love making a batch of my homemade cold brew with a splash of cream. Then, I take a nice break from work with my coffee and muffin.

You could also serve them as part of a brunch spread alongside your favorite savory breakfast items.

chocolate muffin with the wrapper pulled down sitting on a cooling rack on a blue towel

Ingredients

Pumpkin puree is the secret ingredient for making light and fluffy healthy chocolate muffins. This keeps the muffins moist without making them dense.

  • Eggs
  • Pumpkin puree – canned pumpkin, but check that the only ingredient is pumpkin
  • Maple syrup
  • Coconut oil
  • Cocoa powder
  • Baking powder
  • Baking soda
  • Salt
  • Chocolate chips

Ingredient substitutions

It can be difficult to mess with gluten free baking recipes SO I recommend baking the recipe just as it is written above. You can attempt to use plain all purpose flour for this recipe, but you will likely need about a full cup of the flour for it to be equivalent to the coconut flour.

If you want to make this recipe dairy free, simply use dairy free chocolate chips. For a fun spin on the recipe you could also use peanut butter chips or butterscotch chips in place of regular semi sweet chocolate chips.

three quarter view of chocolate chip muffins on a cooling rack

How to make some healthy double chocolate muffins

Step 1: Preheat oven and mix batter

To begin, preheat oven to 350F and line 10 cupcake pan slots with cupcake liners. Next, add eggs, pumpkin puree, maple syrup, and melted coconut oil to a large mixing bowl and mix thoroughly.

Then, in a separate mixing bowl, combine coconut flour, cocoa powder, baking soda, baking powder and sea salt. Fold dry ingredients into wet ingredients and then fold in the chocolate chips.

Step 2: Fill muffin tins and bake

Next, use an ice cream scoop and add 1/4 cup of batter to each of the 10 cupcake mold slots. Then, place in the oven and bake for 26-28 minutes.

Step 3: Cool and enjoy!

Remove them from the oven and allow the healthy chocolate muffins to cool fully before enjoying. Finally, store in an airtight container on the counter for up to 5 days.

side view of a healthy double chocolate muffin with a bite out of it

Storage and Freezing

Once cooked and cooled, store these healthy chocolate muffins in an airtight container at room temperature for up to 5 days. You can also store them in the refrigerator for up to 7 days.

If you want to keep them for longer, you can freeze these muffins for up to 4 months. You can remove them and defrost to enjoy one by one.

Check out these other healthy muffin recipes!

  • Healthy Almond Muffins
  • S’mores Muffins
  • Healthy Blueberry Jam Muffins
  • Healthy Pumpkin Chocolate Chip Muffins

You can find the full recipe below. If you make this recipe, please rate and review it in the comments, or share it with me on Instagram!

pinterest image for healthy double chocolate muffins

You can find the full recipe below. If you make this recipe, please rate and review it in the comments, or share it with me on Instagram!

Email Recipe for Later

Please enable JavaScript in your browser to complete this form.
Loading

Recipe

Healthy Double Chocolate Muffins

5 from 15 votes
Make these healthy double chocolate chip muffins with just a few simple ingredients!
Recipe By: Madeline
Prep: 10 minutes minutes
Cook: 26 minutes minutes
Print Review Pin It SaveSaved!
Servings: 10 muffins

Ingredients

  • 3 eggs
  • 1/2 cup pumpkin puree canned pumpkin, but make sure pumpkin is the only ingredient
  • 1/2 cup maple syrup
  • 1/4 cup melted coconut oil or any neutral tasting vegetable oil
  • 1/4 cup coconut flour
  • 1/2 cup cocoa powder
  • 1 tsp baking soda
  • 1 tsp baking powder
  • 1/4 tsp salt
  • 1/2 cup chocolate chips
Prevent your screen from going dark

Instructions

  • Preheat oven to 350F and line 10 cupcake tin slots with cupcake liners
  • Add eggs, pumpkin puree, maple syrup, and melted coconut oil to a large mixing bowl and mix thoroughly
  • In a separate mixing bowl combine coconut flour, cocoa powder, baking soda, baking powder and sea salt
  • Fold dry ingredients into wet ingredients and then fold in the chocolate chips
  • Add 1/4 cup of batter to each of the 10 cupcake mold slots
  • Place in the oven and bake for 26-28 minutes
  • Remove from the oven and allow them to cool fully before enjoying
  • Store in an airtight container on the counter for up to 5 days

Nutrition Information

Serving: 1g, Calories: 182kcal (9%), Carbohydrates: 22g (7%), Protein: 3g (6%), Fat: 10g (15%), Saturated Fat: 4g (25%), Polyunsaturated Fat: 3g, Monounsaturated Fat: 2g, Trans Fat: 0.04g, Cholesterol: 49mg (16%), Sodium: 238mg (10%), Potassium: 171mg (5%), Fiber: 3g (13%), Sugar: 16g (18%), Vitamin A: 1978IU (40%), Vitamin C: 1mg (1%), Calcium: 64mg (6%), Iron: 1mg (6%)

This website provides approximate nutrition information for convenience and as a courtesy only. Nutrition data is gathered primarily from the USDA Food Composition Database, whenever available, or otherwise other online calculators.

Did you make my Healthy Double Chocolate Muffins?

Review Share on Insta SaveSaved!
I appreciate your reviews SO much! Mention @mad_about_food and hashtag your photo with #madaboutfood
  • Facebook
  • Email
Madeline Avatar

About

Madeline

Hi, I’m Madeline! I am so excited to share my healthy and approachable recipes with you. Here you will find simple, comforting recipes that the whole family will enjoy. Turn on your favorite playlist or podcast and let’s get cooking!
Learn More
  • Facebook
  • Pinterest
  • YouTube
  • Instagram
  • X

Leave a Reply Cancel reply

Your email address will not be published. Required fields are marked *

Recipe Rating




44 responses

  1. Sarah
    October 14, 2025

    5 stars
    These are hands down the BEST chocolate muffins I have ever had or made. I will be making my second batch of the week today. Thank you!

    Reply
    1. Madeline
      October 14, 2025

      LOVE this!

      Reply
  2. Alyssa
    November 4, 2025

    Hi! Can you make these with another type of flour?

    Reply
    1. Madeline
      November 4, 2025

      Hi! Yes, you can attempt to use plain all purpose flour for this recipe, but you will likely need about a full cup of the flour for it to be equivalent to the coconut flour

      Reply
←Older
1 2

ThANKSGIVING FAVORITES

  • Make Ahead Turkey Gravy

    Make Ahead Turkey Gravy

  • Easy Creamy Mashed Potatoes

    Easy Creamy Mashed Potatoes

  • Fresh Green Bean Casserole

    Fresh Green Bean Casserole

  • Pumpkin Pie Bars

    Pumpkin Pie Bars

  • Crispy Maple Bacon Brussels Sprouts

    Crispy Maple Bacon Brussels Sprouts

  • Dry Brine Turkey with Herb Butter

    Dry Brine Turkey with Herb Butter

All Thanksgiving Recipes

Welcome

Hi, I’m Madeline – food blogger and recipe developer based just outside Philadelphia. Join me for simple, comforting recipes designed for the whole family. Turn on your favorite playlist or podcast, and let’s get to cooking!

Read more

Popular Posts

  • Oven Baked Chuck Roast Recipe

    Oven Baked Chuck Roast Recipe

  • Butternut Squash Pasta Sauce

    Butternut Squash Pasta Sauce

  • Potato Cheddar Chive Bakes (Starbucks Copycat)

    Potato Cheddar Chive Bakes (Starbucks Copycat)

  • Oven Baked Starbucks Egg Bites

    Oven Baked Starbucks Egg Bites

  • High Protein Sausage Pancake Muffins

    High Protein Sausage Pancake Muffins

  • Greek Yogurt Waffles

    Greek Yogurt Waffles

image of 6 recipes

Grab a free

E-Book With 6 Of My Top Rated Recipes

Sign me up!

Join Me And over 500k Friends On Instagram

@mad_about_food

“This is my third time making this recipe and it’s a fave for meal prepping! So delicious, quick and easy ☺️” – Jessica

Get recipe

“This was so simple and delicious!! Worked late and still quickly put together a great meal.” – Dana

Get recipe

“So good! Not only was this incredibly easy to make, the flavor was perfect. I will definitely make this again and again!” – Mandy

Get recipe
  • Facebook
  • Instagram
  • Pinterest
  • YouTube
  • TikTok

Courses

Dinners
Breakfasts
Lunch
Dips & Sauces

Popular

One Pan Meal
30 Minute Meals
Meal Prep
Chicken Recipes
Back to Top
About
Contact
Privacy Policy

©

Mad About Food

|

Branding by MRD

|

Theme by OC